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  1. Chapter

    Food Industry and Microbiological Toxins Contamination

    Food safety and quality are affected by the growth and development of microbes in the food industry and processing environment and on food products....
    2024
  2. Chapter

    Microbial Responses to Hydrocarbon Contamination and Its Bioremediation

    Hydrocarbon contamination poses significant environmental challenges due to its persistence and adverse effects on ecosystems. Contamination of soil...
    Susmita Paul, Birson Ingti, ... Santa Ram Joshi in Mineral Transformation and Bioremediation by Geo-Microbes
    2025
  3. Article
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    Rapid and sensitive detection of genome contamination at scale with FCS-GX

    Assembled genome sequences are being generated at an exponential rate. Here we present FCS-GX, part of NCBI’s Foreign Contamination Screen (FCS) tool...

    Alexander Astashyn, Eric S. Tvedte, ... Terence D. Murphy in Genome Biology
    26 February 2024 Open access
  4. Article

    Effects of N fertilization and hybrid genotype on fusarium and aspergillus mycotoxin contamination in maize kernels

    Maize is an essential crop globally, serving multiple functions as food, animal feed, and a raw material for various industries, exhibiting greater...

    Muhoja Sylivester Nyandi, Péter Pepó in Cereal Research Communications
    19 December 2024
  5. Article
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    Removal of sequencing adapter contamination improves microbial genome databases

    Advances in assembling microbial genomes have led to growth of reference genome databases, which have been transformative for applied and basic...

    Andrew H. Moeller, Brian A. Dillard, ... Daniel D. Sprockett in BMC Genomics
    04 November 2024 Open access
  6. Chapter

    Endophytic Fungi for Reduction of Mycotoxin Contamination in Crops

    Common pollutants in agricultural commodities include mycotoxins, produced by toxigenic fungi such as Fusarium and Aspergillus. Conventional...
    Heba Yousef, Kamel A. Abd-Elsalam, Salah M. Abdel-Momen in Fungal Endophytes Volume II
    2025
  7. Article

    Molecular identification and elimination of endophytic contamination using antibiotics from in vitro culture of Vitex peduncularis Wall. Ex Schauer

    Vitex peduncularisWall. Ex Schauer, a medicinal tree in Jharkhand, is rich in flavonoids, iridoids, terpenoids, and essential oils. Its low...

    Runam Kumari, V. Rathna, ... Yogeshwar Mishra in Plant Cell, Tissue and Organ Culture (PCTOC)
    31 January 2025
  8. Article
    Full access

    Microplastic contamination in commercial tilapia feeds: lessons from a developing country

    Microplastic (MP) contamination in aquaculture feed presents an increasing threat to both the aquaculture industry and global public health. This...

    Mohammad Abdul Momin Siddique, Tasnia Tahsin, Koushik Das in Aquaculture International
    17 February 2025 Open access
  9. Chapter

    Guardians of the Depths: Managing Groundwater Contamination in Developing Countries

    Groundwater contamination throughout many developing countries is an unavoidable consequence of increasing activity by human beings, which separates...
    Shahiduzzaman Selim, Babor Ahmad, Mohammad Main Uddin in Water Crises and Sustainable Management in the Global South
    2024
  10. Article

    Microbial remediation technology for heavy metal contamination of mine soil

    The problem of persistent and potentially toxic heavy metal-contaminated soils is widespread worldwide. These heavy metal concentrations have...

    Shuangquan Li, Xiao Yan, ... Xuezhe Zhu in Chemoecology
    24 April 2024
  11. Article

    In vitro culture of date palm: a review of challenges and solutions for managing endophytic bacteria contamination

    Organogenesis is a reliable method for the commercial micropropagation of date palm cultivars, contributing to the preservation of the date palm...

    Mohamed Laaguidi, Reda Meziani, Khalid Sellam in Vegetos
    13 May 2025
  12. Chapter

    Heavy Metal Contamination in Food: Sources, Impact, and Remedy

    Heavy metal contamination of food crops and seafood is a growing global concern with severe health risks to humans and animals. This contamination...
    2024
  13. Article
    Full access

    Bacterial contamination of new dental unit waterlines and efficacy of shock disinfection

    Background

    Bacterial contamination of outlet water from dental unit waterlines (DUWLs) may lead to healthcare-associated infection. The aim of this...

    Alexandre Baudet, Julie Lizon, ... Éric Mortier in BMC Microbiology
    19 December 2024 Open access
  14. Article
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    Improving plant adaptation to soil antimony contamination: the synergistic contribution of arbuscular mycorrhizal fungus and olive mill waste

    Background

    This study aimed to investigate the alterations in biochemical and physiological responses of oat plants exposed to antimony (Sb)...

    Mha Albqmi, Samy Selim, ... Hamada AbdElgawad in BMC Plant Biology
    04 May 2024 Open access
  15. Article

    Limited contamination by trace metals in city colonies of the ant Temnothorax nylanderi (Foerster, 1850)

    In urban environments, trace metals are a widespread class of pollutants that represent a major threat to organisms. Contamination levels in insects...

    Marie Gressler, Angélique Bultelle, ... Mathieu Molet in Urban Ecosystems
    15 October 2024
  16. Article
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    Influence of tailing dust contamination in drinking water on the health status of goats in subtropical Regions

    The contamination of river systems by tailing dust remains a constraint to goat productivity in communal farming systems. A cross-sectional study was...

    William Ntshete Serakalala, Zwelethu Mfanafuthi Mdletshe in Tropical Animal Health and Production
    02 October 2024 Open access
  17. Article
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    GTax: improving de novo transcriptome assembly by removing foreign RNA contamination

    The cost and complexity of generating a complete reference genome means that many organisms lack an annotated reference. An alternative is to use a...

    Roberto Vera Alvarez, David Landsman in Genome Biology
    08 January 2024 Open access
  18. Article

    Heavy metal contamination in fish: sources, mechanisms and consequences

    This comprehensive review provides a thorough exploration of a mounting environmental issue: heavy metal contamination in aquatic ecosystems and its...

    Gagandeep Singh, Sharali Sharma in Aquatic Sciences
    19 September 2024
  19. Article

    Prevention and control of parasitic contamination in industrial microalgae cultures

    In the field of industrial microalgae production, the introduction of parasitic contaminants is an often-neglected topic, but one that represents a...

    Lea-Johanna Liebscher, Anna-Lena Höger, ... Martin Ecke in Journal of Applied Phycology
    16 September 2024
  20. Article
    Full access

    Cont-ID: detection of sample cross-contamination in viral metagenomic data

    Background

    High-throughput sequencing (HTS) technologies completed by the bioinformatic analysis of the generated data are becoming an important...

    Johan Rollin, Wei Rong, Sébastien Massart in BMC Biology
    13 October 2023 Open access
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